CDS
| Accession Number | TCMCG042C78919 |
| gbkey | CDS |
| Protein Id | XP_016511055.1 |
| Location | complement(join(74257..74987,75089..75218,75299..75467,76661..76731,76825..77038,77110..77602,79143..79257,80265..80319,80396..80478,80607..80657,81979..82118,83105..83238,84307..84394,85275..85361,86670..86756,86849..86979,87443..87479,87690..87750,87860..87958)) |
| Gene | LOC107828288 |
| GeneID | 107828288 |
| Organism | Nicotiana tabacum |
Protein
| Length | 991aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA319578 |
| db_source | XM_016655569.1 |
| Definition | PREDICTED: RNA-binding protein 28-like [Nicotiana tabacum] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] |
| KEGG_ko |
ko:K14573
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko03008
[VIEW IN KEGG] map03008 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGAAAGAATAAAAAGACGATGTCTAATGGCGATAGCCAACATTCACCTGCCACCATATTCGTTAACAATTTACCTTATTCTTTCACTAATGCCCAGTTGGAAGAGACGTTCAGTGAAGTTGGACCAATTAGGCGATGCTTTATGGTTACAAATAAAGGTTCAAGCGAGCACCGAGGCTTCGGCTTTGTGCAATTTGCATCTGTAGACGACGCTAACCGTTCCATCGAGCTAAAAAATGGCACAGTGGTTGGAGGAAGGAAAATTGGAGTTAAACAAGCTATGCAACGTGCACCCCGCGAACAACGTCGATCAAAGGGGGATCAAGAAAGCACCGCTGATGCAAAAGATGCCAAGGACGTTCCTTCTACTGAAATAGTCAAGCATGAACAAGCTTCAAGCTCTCGAGGAAAAGAAAGCACTGCTCATAAAGAAGACGACAAGGATGGTCCTTCTACTGAAATAGTTAAGAAGAAACAAGCTTCAAACTCGCAGGGAACAGAAAACCTAGGAAAACCCACTAAAAAAAGAAAGTCTGCATTGCTTTGTGATGGTGCTGCTGAAGAAGGAAATTATTCAGGAAAACAGAGGGTCGCCAAGACAGTTATAATAGGAGGTATTGTAAATGCGGATATGGCAAAGGAGGTTCACCAGCTTGCGCAGAAGTGTGGCACCGTATGTTCTGTTACTTACCCTCTTCCAAAAGAAGAGATTGAAAGTCATGGGCTAGCACACGATGGTTGTAAGATGGATGCTTCATCTGTACTTTTCACTAGTGTCAAATCAGCTCAAGCTTGTGTTGCATCATTACACCAAAAAGAAGTAAATGGAGCAACACTTTGGGCACGCCAACTTGGTGGAGAGGGCTCAAAGACACAAAGGTGGAAACTTATAGTGAGGAATCTTCCTTTTAAGGCCAAAGTGAATGAGATAAAAGATCTGTTTTCAAAAGTTGGCTTCGTGTGGTATGTGGTTATTCCTAAGAATTCTGAGACAGGGTTATCAAAAGGATTTGCGTTTGTCAAATTTACGTCGAAGCAGGATGCAGAGAATGTTATTAAGACATTTAATGGGAAAACATTGAGTAAACGAACTATTGCAGTTGATTGGGCCGTATCAAAAAAGGTTTATGCAGCTGGTGGTCAATCTTCAGCAACCGTACAAGATGGACAGGACGCAAAAGATGATAGTAGTAGCGATACGGATGAAGACATTGAAATTGATGGAAAATCTCAGCAAGCCGAAGAGGACGGAGATGACTCTCACCTTTTAGAAGAAGAAAATAACCAGACTGAAGTTAATTTTGACGAAGAGGCAAACATTGCGAAAAAAGTTCTTCAGAATTTCATTTCTCCAACTTCAATAGGGCCAACTACTTCTACAAATGATTTTTCAGGCCTTCCCAAGCAGGGGAAGGATGTTGAAACTATTCTCCCACCAGATGAACCACTGGGTGCATCTACGGCAAATAAAACACCACACGACAATTTAGACAAGAGCAAAGAGATTAATGCTGGGCAGAGTGAGGGAGCAGATGATCTGCAGGGAACAGTTTTCATTAGCAACCTTCCTTTTGATGTTGATAATAAAGAAGTCAAACAACGGTTTTCTGCTTTTGGTGAAGTGGAATACTTTGCTCCGGTTCTTGACCGAGTCACCAAGCGACCAAAGGGTACTGGTTTTCTCAAATTTAAAACAGCAGAGGCTGCTGAAGCTACTGTTTCCGCTGCCAATGTTGTGGATGGTTTGGGTGTCTTTCTGAAGGGTCGGCAATTAAAGATTTTGAAGGCTTTGGACAAGAAAGCTGCTCATGATAAGGAGTTGGAGAAGGCCAAAAAGGAGGATAATGACCACCGCAACCTTTACCTGGCAAAGGAGGGTCTTATTGTGGAGGGGACCCCAGCTGCTGCAGGTGTTTCAGTGAGTGATATGTCAAAGCGCAAGGGGCTTCAAGAAAAGAAGATGATCAAGCTGAAATCCCCAAATTTCCATGTGTCAAGGACACGGCTGATTGTATACAATCTTCCCAAGTCGATGAGTGAAAAACAGCTGAAGACACTTTGCATTGATGCAGTTACCTCTCGTGCTACTAAGCAAAAGCCTGTGATCCGGCAGATAAAGTTTTTGAAGGATGTGAAAAAAGGACAAGTAGTAGCAAAGAATCATTCTCGCGGAGTAGCTTTTCTTGAGTTCTCAGAGCATCAACATGCACTTGTGGCTTTAAGAGTTCTCAACAACAATCCTGAGACTTTTGGTCCTGAGCATCGTCCAATAGTGGAGTTTGCTCTTGATAATGTGCAAACAATGAAGCTTCGTAATCAGAAACTTCAGCAGCAAGGTTTTAACAAGAACAGAGAAGATCTGCAGCAGAATGCCAATAAAACTGAACTGAATCCCCGTGATAAACAGTCAAGAAAACGCAAGTCCAGTGGGGACACATCAGTTGCTGGGAATAGAGATGTAGTGAAAAGCAAACGTGTCAGAGGTGCCACCGCAGAGGAAGGCAATGGGTCATCAGTTTCAGGGAGTAAAGATGGAGATGAACTGAAAAATAGAGGTGCCAGAGGAACCAACTCCGAAGAAGAAAGAGATGAGAAGAAGAATAACAAGAAGGAAGGTAAGAAGCTTGGAGGCACGAAACAAAAGCCAAAAGATAATCAAGAAGGAAAAAAGCTTGGCAGGTTTGGAAATGAACATTCAGATAATGCTGCTCTCAAGGTTGGACATAAAGAAGATGTTGCAGTGAGAACAAAAAGGAGGAAGTTGGAAGATAAAACTAACCAACAGAAACAAACTATGAGTTTACAGGTCAAGAAAAAGGATAAAAAGAATAAAAACCCGGCGGGACGGGATGCTGAGGACAAGTTGGATATGCTGATTGAGCAATACAGATCCAAATTCACAAACAACAGTTCTAATCAAACTGATAGTAAGCAGCAGGGCTCTAAACAGCTTAAAAAGTGGTTCCAATCCTAA |
| Protein: MGKNKKTMSNGDSQHSPATIFVNNLPYSFTNAQLEETFSEVGPIRRCFMVTNKGSSEHRGFGFVQFASVDDANRSIELKNGTVVGGRKIGVKQAMQRAPREQRRSKGDQESTADAKDAKDVPSTEIVKHEQASSSRGKESTAHKEDDKDGPSTEIVKKKQASNSQGTENLGKPTKKRKSALLCDGAAEEGNYSGKQRVAKTVIIGGIVNADMAKEVHQLAQKCGTVCSVTYPLPKEEIESHGLAHDGCKMDASSVLFTSVKSAQACVASLHQKEVNGATLWARQLGGEGSKTQRWKLIVRNLPFKAKVNEIKDLFSKVGFVWYVVIPKNSETGLSKGFAFVKFTSKQDAENVIKTFNGKTLSKRTIAVDWAVSKKVYAAGGQSSATVQDGQDAKDDSSSDTDEDIEIDGKSQQAEEDGDDSHLLEEENNQTEVNFDEEANIAKKVLQNFISPTSIGPTTSTNDFSGLPKQGKDVETILPPDEPLGASTANKTPHDNLDKSKEINAGQSEGADDLQGTVFISNLPFDVDNKEVKQRFSAFGEVEYFAPVLDRVTKRPKGTGFLKFKTAEAAEATVSAANVVDGLGVFLKGRQLKILKALDKKAAHDKELEKAKKEDNDHRNLYLAKEGLIVEGTPAAAGVSVSDMSKRKGLQEKKMIKLKSPNFHVSRTRLIVYNLPKSMSEKQLKTLCIDAVTSRATKQKPVIRQIKFLKDVKKGQVVAKNHSRGVAFLEFSEHQHALVALRVLNNNPETFGPEHRPIVEFALDNVQTMKLRNQKLQQQGFNKNREDLQQNANKTELNPRDKQSRKRKSSGDTSVAGNRDVVKSKRVRGATAEEGNGSSVSGSKDGDELKNRGARGTNSEEERDEKKNNKKEGKKLGGTKQKPKDNQEGKKLGRFGNEHSDNAALKVGHKEDVAVRTKRRKLEDKTNQQKQTMSLQVKKKDKKNKNPAGRDAEDKLDMLIEQYRSKFTNNSSNQTDSKQQGSKQLKKWFQS |